Tsai-sang Dederichs (Germany)

University Heart Center Freiburg- Bad Krozingen Cardiology and Angiology 1, AG Hilgendorf
My PhD project aims to unravel the impact of clonal hematopoietic of indeterminate potential (CHIP) on atherogenesis. To gain mechanistic insights of how genetic abnormality alters cellular function that ultimately contributes to atherosclerosis, I established a single-cell multi-omic sequencing method that allows a parallel sequencing of gDNA and RNA from the same single cell. The approach allows us to understand the implication of CHIP mutation to an unprecedented granularity by directly comparing the transcriptome of wild-type and CHIP-mutated cells within the same individual.

Author Of 1 Presentation

O033 - CHIP mutations mediate human atherosclerosis by activating monocyte pro-inflammatory pathways without evidently promoting monocyte chemotaxis (ID 713)

Session Type
Vascular Biology
Session Time
10:30 - 12:00
Date
Tue, 01.06.2021
Room
Live Streamed
Lecture Time
11:18 - 11:26

Abstract

Background and Aims

Clonal hematopoiesis of indeterminate potential (CHIP) is an age‑associated expansion of blood cells that carry specific somatic mutations. CHIP mutations double the risk of CAD and are associated with worse overall survival. Our research aims to understand how CHIP mutations change the myeloid cell biology and contribute to atherosclerosis.

Methods

We screened 812 patients admitted for left heart coronary angiography in University Heart Center Freiburg and conducted targeted genomic sequencing to identify CHIP carriers. We applied single‑cell gDNA/mRNA parallel sequencing to perform intra‑individual comparison of gene expression in monocytes carrying DNMT3A H882 hotspot mutation and that in non‑mutated monocytes.

Results

The prevalence of CHIP mutation was at least two times higher in all age groups of our cohort than that of general population. Middle‑aged (age of 40 to 69) patients with mutations in the two most common CHIP genes, DNMT3A and TET2, had significantly higher burden of CAD than those without CHIP mutations. Single‑cell RNA profiling revealed that monocytes with DNMT3A H882C mutation formed separate clusters and distinctively increased the expression of genes that regulate IFNγ, IL‑6, IL‑12, and TNF production or response. Genes regulating monocyte chemotaxis was not differentially expressed in mutated monocytes.

Conclusions

We confirmed the enhanced risk of CAD associated with CHIP mutations. With single‑cell gDNA/RNA parallel sequencing, we demonstrated the direct effect of CHIP mutation on monocyte biology, avoiding inter‑individual variation. DNMT3A H882C mutation altered gene expression of monocytes and activated pro‑inflammatory pathways without noticeable influences on monocyte chemotaxis.

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Presenter of 1 Presentation

O033 - CHIP mutations mediate human atherosclerosis by activating monocyte pro-inflammatory pathways without evidently promoting monocyte chemotaxis (ID 713)

Session Type
Vascular Biology
Session Time
10:30 - 12:00
Date
Tue, 01.06.2021
Room
Live Streamed
Lecture Time
11:18 - 11:26

Abstract

Background and Aims

Clonal hematopoiesis of indeterminate potential (CHIP) is an age‑associated expansion of blood cells that carry specific somatic mutations. CHIP mutations double the risk of CAD and are associated with worse overall survival. Our research aims to understand how CHIP mutations change the myeloid cell biology and contribute to atherosclerosis.

Methods

We screened 812 patients admitted for left heart coronary angiography in University Heart Center Freiburg and conducted targeted genomic sequencing to identify CHIP carriers. We applied single‑cell gDNA/mRNA parallel sequencing to perform intra‑individual comparison of gene expression in monocytes carrying DNMT3A H882 hotspot mutation and that in non‑mutated monocytes.

Results

The prevalence of CHIP mutation was at least two times higher in all age groups of our cohort than that of general population. Middle‑aged (age of 40 to 69) patients with mutations in the two most common CHIP genes, DNMT3A and TET2, had significantly higher burden of CAD than those without CHIP mutations. Single‑cell RNA profiling revealed that monocytes with DNMT3A H882C mutation formed separate clusters and distinctively increased the expression of genes that regulate IFNγ, IL‑6, IL‑12, and TNF production or response. Genes regulating monocyte chemotaxis was not differentially expressed in mutated monocytes.

Conclusions

We confirmed the enhanced risk of CAD associated with CHIP mutations. With single‑cell gDNA/RNA parallel sequencing, we demonstrated the direct effect of CHIP mutation on monocyte biology, avoiding inter‑individual variation. DNMT3A H882C mutation altered gene expression of monocytes and activated pro‑inflammatory pathways without noticeable influences on monocyte chemotaxis.

Hide