Poster viewing and lunch

178P - Deep learning reveals spatial disorganisation of histological features in the normal breast of breast cancer patients (ID 390)

Lecture Time
12:15 - 12:15
Session Name
Poster viewing and lunch
Room
Exhibition area
Date
Fri, 12.05.2023
Time
12:15 - 13:00
Speakers
  • Siyuan Chen (London, United Kingdom)
Authors
  • Siyuan Chen (London, United Kingdom)
  • Mario Parreno-Centeno (London, United Kingdom)
  • Gregory Verghese (London, United Kingdom)
  • Graham Booker (London, United Kingdom)
  • Isobelle Wall (London, United Kingdom)
  • Fathima Mohamed (London, United Kingdom)
  • Salim Arsian (London, United Kingdom)
  • Pandu Raharja-Liu (London, United Kingdom)
  • Aasiyah Oozeer (London, United Kingdom)
  • Marcello D'angelo (London, United Kingdom)
  • Rachel Barrow (London, United Kingdom)
  • Rachel Nelan (London, United Kingdom)
  • Marcelo Sobral-Leite (Amsterdam, Netherlands)
  • Esther Lips (Amsterdam, Netherlands)
  • Fabio De Martino (Lausanne, Switzerland)
  • Cathrin Brisken (Lausanne, Switzerland)
  • Cheryl Gillett (London, United Kingdom)
  • Louise Jones (London, United Kingdom)
  • Sarah E. Pinder (London, United Kingdom)
  • Anita Grigoriadis (London, United Kingdom)

Abstract

Background

Germline BRCA1/2 mutation carriers have an increased risk of developing breast cancer, however the characterisation of histological features of the normal breast for these high-risk patients has not so far been performed on large-scale image collections. Hence, deep learning-based framework is proposed to identify subvisual morphometric phenotypes in normal breast tissue of women with different risk of developing cancer.

Methods

Digitised 1190 whole slide images of H&E-stained breast normal tissue images from women across different age groups were collected from 5 different biobanks, i.e., healthy donors, healthy patients derived from reduction mammoplasty, healthy patients with known germline BRCA1/2 alterations derived from risk reduction mastectomy, and the contralateral/ipsilateral tissue from breast cancer patients with known germline pathogenic BRCA1/2 alterations, totalling 282 patients. To characterise the epithelial patterns, 70 WSI were manually annotated. A convolution deep learning (DL)-network was implemented to predict the chronological age group (<30y or >50y) of tiles of epithelium. K-means clustering identified specific histological age-associated features. Class activation map and cellular segmentation were used for interpretation.

Results

Our DL-based framework revealed inter and intra-variability of epithelial histological patterns in the normal breast of healthy women, underlying the physiological ageing process. The proportion of lobule types differed in normal breast tissue of <30y or >50y healthy women. In normal breast of younger women, densely packed acinar structures with a higher glandular-to-stromal ratio are predominant and display higher neighbourhood enrichment. Normal breast tissue of young breast cancer patients revealed histological tissue-ageing patterns deviating from their chronological age.

Conclusions

Our DL-framework exposed histological patterns associated with the variation of the underlying ageing process of normal breast tissue, which may indicate early signs of cancerous in high-risk germline BRCA1/2 carriers.

Legal entity responsible for the study

The authors.

Funding

KCL-China Scholarship Council (CSC).

Disclosure

All authors have declared no conflicts of interest.

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