Ana M. Medeiros (Portugal)
Instituto Nacional de Saúde Doutor Ricardo Jorge Cardiovascular Research Group, R&D Unit, Department of Health Promotion and Prevention of Noncommunicable DiseasesAuthor Of 1 Presentation
O019 - miRNA target-binding sites as regulators of genes involved in the lipid metabolism might explain the hypercholesterolaemia in FH patients (ID 903)
Abstract
Background and Aims
Familial hypercholesterolemia (FH) is due to mutations in LDLR, APOB and PCSK9, however, about 50% of clinical FH patients do not have an identifiable genetic cause. MicroRNAs (small non-coding RNAs) are negative regulators of gene expression and creation of new biding sites can be the cause of hypercholesterolaemia in mutation-negative families. The present work aims to analyse miRNAs targets as regulators of genes involved in lipid metabolism in FH patients.
Methods
A sample of 180 mutation-negative individuals (FH negative) was re-sequenced using NGS and the 3’UTR regions of LDLR, APOB and PCSK9 were analysed. miRNA-SNP database was used to predict target gain or loss of miRNA:mRNA binding sites disturbed by SNPs in the 3'UTR. Two groups of samples were additionally sequenced, 174 FH mutation-positive individuals and 143 normolipidemic individuals.
Results
Preliminary results show that 99% of the FH negative individuals present 2 SNPs predicted to gain 2 miRNA targets in the LDLR 3’UTR. Gain of these miRNA target-binding sites might negatively regulate LDLR gene expression in the liver. We have also identified 1 SNP (1 individual) predicted to lose a miRNA target in the APOB 3’UTR and 4 SNPs (14 individuals) predicted to lose miRNAs targets in the PCSK9 3’UTR. Loss of miRNA target-binding sites in APOB and PCSK9 3’UTRs can contribute to a higher expression of these genes in the liver. FH positive and normolipidemic cohorts are being analysed.
Conclusions
We have identified several SNPs that predict to gain/lose miRNAs target-binding sites that might explain the hypercholesterolaemia in FH mutation-negative.
Presenter of 1 Presentation
O019 - miRNA target-binding sites as regulators of genes involved in the lipid metabolism might explain the hypercholesterolaemia in FH patients (ID 903)
Abstract
Background and Aims
Familial hypercholesterolemia (FH) is due to mutations in LDLR, APOB and PCSK9, however, about 50% of clinical FH patients do not have an identifiable genetic cause. MicroRNAs (small non-coding RNAs) are negative regulators of gene expression and creation of new biding sites can be the cause of hypercholesterolaemia in mutation-negative families. The present work aims to analyse miRNAs targets as regulators of genes involved in lipid metabolism in FH patients.
Methods
A sample of 180 mutation-negative individuals (FH negative) was re-sequenced using NGS and the 3’UTR regions of LDLR, APOB and PCSK9 were analysed. miRNA-SNP database was used to predict target gain or loss of miRNA:mRNA binding sites disturbed by SNPs in the 3'UTR. Two groups of samples were additionally sequenced, 174 FH mutation-positive individuals and 143 normolipidemic individuals.
Results
Preliminary results show that 99% of the FH negative individuals present 2 SNPs predicted to gain 2 miRNA targets in the LDLR 3’UTR. Gain of these miRNA target-binding sites might negatively regulate LDLR gene expression in the liver. We have also identified 1 SNP (1 individual) predicted to lose a miRNA target in the APOB 3’UTR and 4 SNPs (14 individuals) predicted to lose miRNAs targets in the PCSK9 3’UTR. Loss of miRNA target-binding sites in APOB and PCSK9 3’UTRs can contribute to a higher expression of these genes in the liver. FH positive and normolipidemic cohorts are being analysed.
Conclusions
We have identified several SNPs that predict to gain/lose miRNAs target-binding sites that might explain the hypercholesterolaemia in FH mutation-negative.